PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Achn052151
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Actinidiaceae; Actinidia
Family MYB_related
Protein Properties Length: 295aa    MW: 33110.4 Da    PI: 4.7222
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Achn052151genomeIKGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding28.82.9e-0947702347
                     -HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding 23 tWktIartmgkgRtlkqcksrwqky 47
                     +W+ Ia++++ gRt++++k++w+++
       Achn052151 47 RWAHIASHLP-GRTDNEIKNYWNSW 70
                     4*********.************98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF466893.28E-84376IPR009057Homeodomain-like
CDDcd001671.07E-74571No hitNo description
PfamPF002493.3E-74670IPR001005SANT/Myb domain
Gene3DG3DSA:1.10.10.601.9E-114677IPR009057Homeodomain-like
PROSITE profilePS500906.5164671IPR017877Myb-like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 295 aa     Download sequence    Send to blast
MTLSSICHPF NDRNEYFGLI EMNSLNLTSN VKVAISSICC PIKSVNRWAH IASHLPGRTD  60
NEIKNYWNSW IKKKIRKPLA PPATNKPNPN HRYSLFGSTA NQHHQVDFLN QDLLTKPPVL  120
DELFSSPSAF FMFDTSSILA GISTDGGNER GEIFRELNCE TWHMNQQQVT TLPSKTCFTT  180
SMDSNCLPPL IENMESMVPI EMQGCNINEE KEMAMECLQR QELNEWVESQ TCPSFLFWDH  240
VEGPLGPQMN NAAKCDVWSE YLDSRINEAA LGGEEVEPTS SNMGITLSSL PSSL*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_002273004.12e-84PREDICTED: transcription factor MYB86
TrEMBLD7TV592e-84D7TV59_VITVI; Putative uncharacterized protein
STRINGVIT_02s0025g00320.t015e-84(Vitis vinifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA124391722
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G63910.16e-30myb domain protein 103